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Christiane Hassenrueck edited this page 1 month ago
Welcome to the Wiki. Here you will find additional information about the tutorials and information material provided in this repository, as well as links to further reading and videos.
Table of contents
Most important for new members: Bioinf IOW intranet
Tutorials for in-house workflows:
- Amplicon sequence analysis using dada2
- Denoising vs. clustering
- Metagenomic sequence assembly, binning, and annotation
- Phylogenetic placement
R tutorials:
- Microbio practical 2021: Basic R introduction and analysis tutorial for 16S amplicon data.
Selection of potentially interesting links, tutorials, bioinformatic and data analysis tools:
Literature list related to sequence analysis methods:
Links to other online tutorials
- Getting started with vim: Very useful to modify text files on the server and to not panic if you get conflicts in a git commit. Here is also a more condensed cheatsheet.
- Some older tutorials that I prepared in the past are also publically accessible on my github account in the Tutorials repository.
- A bash intro that comes highly recommended.