This repository contains a collection of scripts and workflows that may be used as templates for amplicon and shotgun sequence data analysis.

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Branch: master

master

metaG_March23

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workflow_templates/metaG_Illumina_PE

History

Christiane Hassenrueck 0fee3cb568 updated and validated metaG workflow until bin summary		1 month ago
..
assets	added short read classification	1 year ago
config	updated and validated metaG workflow until bin summary	1 month ago
env_exports	saving env exports for metaG pipeline state until March 2023	3 months ago
envs	updated and validated metaG workflow until bin summary	1 month ago
images	updated wmetaG workflow schematic	6 months ago
rules	updated and validated metaG workflow until bin summary	1 month ago
scripts	updated and validated metaG workflow until bin summary	1 month ago
CITATION.cff	updated licenses	1 year ago
LICENSE	added license and citation files, major update to taxonomy parsing in amplicon workflow	1 year ago
Snakefile	updated and validated metaG workflow until bin summary	1 month ago