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Regularized build scripts.

distribute-radiation-on-surface-types
Sven Karsten 2 years ago
parent
65ac97619e
commit
b5989c638c
7 changed files with 102 additions and 100 deletions
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  1. 46
      build.sh
  2. 34
      build_debug.sh
  3. 34
      build_fast.sh
  4. 26
      build_haumea.sh
  5. 54
      build_phy-2.sh
  6. 4
      start_build_haumea.sh
  7. 4
      start_build_phy-2.sh

46
build.sh
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@ -1,34 +1,22 @@
#!/bin/bash
# LOAD REQUIRED MODULES
module load intel/19.1.0
module load openmpi/intel.19/3.1.6
module load netcdf/intel.19/4.7.4
target=$1
debug=${2:-"release"}
fast=${3:-"fast"}
# GET IOW ESM ROOT PATH
export IOW_ESM_ROOT="$( cd "$( dirname "${BASH_SOURCE[0]}" )" >/dev/null 2>&1 && pwd )/../.."
source ../../local_scripts/identify_target.sh $target $debug $fast
# SET SYSTEM-SPECIFIC COMPILER OPTIONS AND PATHS
# compile mode: "PRODUCTION" or "DEBUG"
export IOW_ESM_COMPILE_MODE="PRODUCTION"
# include paths
export IOW_ESM_NETCDF_INCLUDE="${NETCDF_INCLUDE_PATH}"
export IOW_ESM_NETCDF_LIBRARY="${NETCDF_LIBRARY_PATH}"
# executables
export IOW_ESM_MAKE="/usr/bin/make"
export IOW_ESM_FC="mpifort"
export IOW_ESM_CC="mpicc"
export IOW_ESM_LD="mpifort"
# compiler flags
export IOW_ESM_CPPDEFS="-DCOUP_OAS -DOASIS_IOW_ESM"
export IOW_ESM_FFLAGS="-O3 -r8 -no-prec-div -fp-model fast=2 -xHost -I${IOW_ESM_NETCDF_INCLUDE}/"
export IOW_ESM_CFLAGS="-O3 -r8 -no-prec-div -fp-model fast=2 -xHost -I${IOW_ESM_NETCDF_INCLUDE}/"
export IOW_ESM_LDFLAGS="-L${IOW_ESM_NETCDF_LIBRARY} -lnetcdf -lnetcdff -Wl,-rpath,${IOW_ESM_NETCDF_LIBRARY}"
# component to build
component="MOM5"
# MAKE CLEAN
rm -r ${IOW_ESM_ROOT}/components/MOM5/exec/IOW_ESM_${IOW_ESM_COMPILE_MODE}
# deploy the code from local source
echo rsync -r -i -u src ${dest}/components/${component}/.
echo rsync -i -u start_build_${target}.sh ${dest}/components/${component}/
echo rsync -i -u build_${target}.sh ${dest}/components/${component}/
rsync -r -i -u src ${dest}/components/${component}/.
rsync -i -u start_build_${target}.sh ${dest}/components/${component}/
rsync -i -u build_${target}.sh ${dest}/components/${component}/
# RUN BUILD COMMAND
cd ${IOW_ESM_ROOT}/components/MOM5/exp
./MOM_compile.csh
cd ${IOW_ESM_ROOT}/components/MOM5
# start the build process
echo ssh -t "${user_at_dest}" "cd ${dest_folder}/components/${component}/; bash -c \"source ~/.bash_profile; source start_build_${target}.sh $debug $fast\""
ssh -t "${user_at_dest}" "cd ${dest_folder}/components/${component}/; bash -c \"source ~/.bash_profile; source start_build_${target}.sh $debug $fast\""
echo "$component $target $debug $fast" > ../LAST_BUILD

34
build_debug.sh
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@ -1,34 +0,0 @@
#!/bin/bash
# LOAD REQUIRED MODULES
module load intel/19.1.0
module load openmpi/intel.19/3.1.6
module load netcdf/intel.19/4.7.4
# GET IOW ESM ROOT PATH
export IOW_ESM_ROOT="$( cd "$( dirname "${BASH_SOURCE[0]}" )" >/dev/null 2>&1 && pwd )/../.."
# SET SYSTEM-SPECIFIC COMPILER OPTIONS AND PATHS
# compile mode: "PRODUCTION" or "DEBUG"
export IOW_ESM_COMPILE_MODE="DEBUG"
# include paths
export IOW_ESM_NETCDF_INCLUDE="${NETCDF_INCLUDE_PATH}"
export IOW_ESM_NETCDF_LIBRARY="${NETCDF_LIBRARY_PATH}"
# executables
export IOW_ESM_MAKE="/usr/bin/make"
export IOW_ESM_FC="mpifort"
export IOW_ESM_CC="mpicc"
export IOW_ESM_LD="mpifort"
# compiler flags
export IOW_ESM_CPPDEFS="-DCOUP_OAS -DOASIS_IOW_ESM"
export IOW_ESM_FFLAGS="-O0 -r8 -g -traceback -check all -fp-model fast=2 -xHost -I${IOW_ESM_NETCDF_INCLUDE}/"
export IOW_ESM_CFLAGS="-O0 -r8 -g -traceback -check all -fp-model fast=2 -xHost -I${IOW_ESM_NETCDF_INCLUDE}/"
export IOW_ESM_LDFLAGS="-g -traceback -L${IOW_ESM_NETCDF_LIBRARY} -lnetcdf -lnetcdff -Wl,-rpath,${IOW_ESM_NETCDF_LIBRARY}"
# MAKE CLEAN
rm -r ${IOW_ESM_ROOT}/components/MOM5/exec/IOW_ESM_${IOW_ESM_COMPILE_MODE}
# RUN BUILD COMMAND
cd ${IOW_ESM_ROOT}/components/MOM5/exp
./MOM_compile.csh
cd ${IOW_ESM_ROOT}/components/MOM5

34
build_fast.sh
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@ -1,34 +0,0 @@
#!/bin/bash
# LOAD REQUIRED MODULES
module load intel/18.0.6
module load impi/2018.5
module load netcdf/intel/4.7.3
# GET IOW ESM ROOT PATH
export IOW_ESM_ROOT="$( cd "$( dirname "${BASH_SOURCE[0]}" )" >/dev/null 2>&1 && pwd )/../.."
# SET SYSTEM-SPECIFIC COMPILER OPTIONS AND PATHS
# compile mode: "PRODUCTION" or "DEBUG"
export IOW_ESM_COMPILE_MODE="PRODUCTION"
# include paths
export IOW_ESM_NETCDF_INCLUDE="/sw/dataformats/netcdf/intel.18/4.7.3/skl/include"
export IOW_ESM_NETCDF_LIBRARY="/sw/dataformats/netcdf/intel.18/4.7.3/skl/lib"
# executables
export IOW_ESM_MAKE="/usr/bin/make"
export IOW_ESM_FC="mpiifort"
export IOW_ESM_CC="mpiicc"
export IOW_ESM_LD="mpiifort"
# compiler flags
export IOW_ESM_CPPDEFS="-DCOUP_OAS -DOASIS_IOW_ESM"
export IOW_ESM_FFLAGS="-O3 -xCORE-AVX512 -r8 -fp-model precise -align array64byte -I${IOW_ESM_NETCDF_INCLUDE}/"
export IOW_ESM_CFLAGS="-O3 -I${IOW_ESM_NETCDF_INCLUDE}/"
export IOW_ESM_LDFLAGS="-g -traceback -L${IOW_ESM_NETCDF_LIBRARY} -lnetcdf -lnetcdff -Wl,-rpath,${IOW_ESM_NETCDF_LIBRARY}"
# MAKE CLEAN
#rm -r ${IOW_ESM_ROOT}/components/MOM5/exec/IOW_ESM_${IOW_ESM_COMPILE_MODE}
# RUN BUILD COMMAND
cd ${IOW_ESM_ROOT}/components/MOM5/exp
./MOM_compile.csh
cd ${IOW_ESM_ROOT}/components/MOM5

26
build_debug_fast.sh → build_haumea.sh
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@ -1,4 +1,8 @@
#!/bin/bash
debug=${1:-"release"}
rebuild=${2:-"fast"}
# LOAD REQUIRED MODULES
module load intel/19.1.0
module load openmpi/intel.19/3.1.6
@ -9,7 +13,15 @@ export IOW_ESM_ROOT="$( cd "$( dirname "${BASH_SOURCE[0]}" )" >/dev/null 2>&1 &&
# SET SYSTEM-SPECIFIC COMPILER OPTIONS AND PATHS
# compile mode: "PRODUCTION" or "DEBUG"
export IOW_ESM_COMPILE_MODE="DEBUG"
if [ $debug == "debug" ]; then
export IOW_ESM_COMPILE_MODE="DEBUG"
elif [ $debug == "release" ]; then
export IOW_ESM_COMPILE_MODE="PRODUCTION"
else
echo "Compile mode is not specified correctly. Use debug or release"
exit;
fi
# include paths
export IOW_ESM_NETCDF_INCLUDE="${NETCDF_INCLUDE_PATH}"
export IOW_ESM_NETCDF_LIBRARY="${NETCDF_LIBRARY_PATH}"
@ -20,12 +32,20 @@ export IOW_ESM_CC="mpicc"
export IOW_ESM_LD="mpifort"
# compiler flags
export IOW_ESM_CPPDEFS="-DCOUP_OAS -DOASIS_IOW_ESM"
if [ $debug == "debug" ]; then
export IOW_ESM_FFLAGS="-O0 -r8 -g -traceback -check all -fp-model fast=2 -xHost -I${IOW_ESM_NETCDF_INCLUDE}/"
export IOW_ESM_CFLAGS="-O0 -r8 -g -traceback -check all -fp-model fast=2 -xHost -I${IOW_ESM_NETCDF_INCLUDE}/"
export IOW_ESM_CFLAGS="-O0 -r8 -g -traceback -fp-model fast=2 -xHost -I${IOW_ESM_NETCDF_INCLUDE}/"
export IOW_ESM_LDFLAGS="-g -traceback -L${IOW_ESM_NETCDF_LIBRARY} -lnetcdf -lnetcdff -Wl,-rpath,${IOW_ESM_NETCDF_LIBRARY}"
else
export IOW_ESM_FFLAGS="-O3 -r8 -no-prec-div -fp-model fast=2 -xHost -I${IOW_ESM_NETCDF_INCLUDE}/"
export IOW_ESM_CFLAGS="-O3 -r8 -no-prec-div -fp-model fast=2 -xHost -I${IOW_ESM_NETCDF_INCLUDE}/"
export IOW_ESM_LDFLAGS="-L${IOW_ESM_NETCDF_LIBRARY} -lnetcdf -lnetcdff -Wl,-rpath,${IOW_ESM_NETCDF_LIBRARY}"
fi
# MAKE CLEAN
#rm -r ${IOW_ESM_ROOT}/components/MOM5/exec/IOW_ESM_${IOW_ESM_COMPILE_MODE}
if [ $rebuild == "rebuild" ]; then
rm -r ${IOW_ESM_ROOT}/components/MOM5/exec/IOW_ESM_${IOW_ESM_COMPILE_MODE}
fi
# RUN BUILD COMMAND
cd ${IOW_ESM_ROOT}/components/MOM5/exp

54
build_phy-2.sh
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@ -0,0 +1,54 @@
#!/bin/bash
debug=${1:-"release"}
rebuild=${2:-"fast"}
# LOAD REQUIRED MODULES
module load intel/2017.1.132
module load openmpi-intel/2.0.1-ifort-2017.1.132
module load netcdf/4.7.4-intel_2017
# GET IOW ESM ROOT PATH
export IOW_ESM_ROOT="$( cd "$( dirname "${BASH_SOURCE[0]}" )" >/dev/null 2>&1 && pwd )/../.."
# SET SYSTEM-SPECIFIC COMPILER OPTIONS AND PATHS
# compile mode: "PRODUCTION" or "DEBUG"
if [ $debug == "debug" ]; then
export IOW_ESM_COMPILE_MODE="DEBUG"
elif [ $debug == "release" ]; then
export IOW_ESM_COMPILE_MODE="PRODUCTION"
else
echo "Compile mode is not specified correctly. Use debug or release"
exit;
fi
# include paths
export IOW_ESM_NETCDF_INCLUDE="${NETCDF_INC}"
export IOW_ESM_NETCDF_LIBRARY="${NETCDF_LIB}"
# executables
export IOW_ESM_MAKE="/usr/bin/make"
export IOW_ESM_FC="mpifort"
export IOW_ESM_CC="mpicc"
export IOW_ESM_LD="mpifort"
# compiler flags
export IOW_ESM_CPPDEFS="-DCOUP_OAS -DOASIS_IOW_ESM"
if [ $debug == "debug" ]; then
export IOW_ESM_FFLAGS="-O0 -r8 -g -traceback -check all -fp-model fast=2 -xHost -I${IOW_ESM_NETCDF_INCLUDE}/"
export IOW_ESM_CFLAGS="-O0 -r8 -g -traceback -fp-model fast=2 -xHost -I${IOW_ESM_NETCDF_INCLUDE}/"
export IOW_ESM_LDFLAGS="-g -traceback -L${IOW_ESM_NETCDF_LIBRARY} -lnetcdf -lnetcdff -Wl,-rpath,${IOW_ESM_NETCDF_LIBRARY}"
else
export IOW_ESM_FFLAGS="-O3 -r8 -no-prec-div -fp-model fast=2 -xHost -I${IOW_ESM_NETCDF_INCLUDE}/"
export IOW_ESM_CFLAGS="-O3 -r8 -no-prec-div -fp-model fast=2 -xHost -I${IOW_ESM_NETCDF_INCLUDE}/"
export IOW_ESM_LDFLAGS="-L${IOW_ESM_NETCDF_LIBRARY} -lnetcdf -lnetcdff -Wl,-rpath,${IOW_ESM_NETCDF_LIBRARY}"
fi
# MAKE CLEAN
if [ $rebuild == "rebuild" ]; then
rm -r ${IOW_ESM_ROOT}/components/MOM5/exec/IOW_ESM_${IOW_ESM_COMPILE_MODE}
fi
# RUN BUILD COMMAND
cd ${IOW_ESM_ROOT}/components/MOM5/exp
./MOM_compile.csh
cd ${IOW_ESM_ROOT}/components/MOM5

4
start_build_haumea.sh
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@ -0,0 +1,4 @@
debug=${1:-"debug"} # debug/release
fast=${2:-"fast"} # fast/rebuild
srun -t 01:00:00 -p compute -N1 --tasks-per-node 1 --pty bash -c "source ~/.bash_profile; source build_haumea.sh ${debug} ${fast}"

4
start_build_phy-2.sh
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@ -0,0 +1,4 @@
debug=${1:-"debug"} # debug/release
fast=${2:-"fast"} # fast/rebuild
source build_phy-2.sh ${debug} ${fast}
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