Browse Source

add methods dataset doc

feature/preprocessing
Henning Schröder 7 months ago
parent
commit
95caa11093
  1. 6
      README.md
  2. 1
      mbmbm/benchmark/__init__.py
  3. 0
      mbmbm/doc/datasets.md
  4. 0
      mbmbm/doc/methods.md
  5. 392
      poetry.lock
  6. 1
      pyproject.toml

6
README.md

@ -17,6 +17,12 @@ Please coordinate contributions with Henning Schröder (henning.schroeder@planet
3. Make a pull request into the **devel** branch and add a reviewer as well as a short description
4. The merge is done by the reviewer (for quality control ;))
## Methdods
see [here](mbmbm/doc/methods.md)
## Datasets
see [here](mbmbm/doc/datasets.md)
## TODO
- [Issue #1] Decide on a set of datasets that fit the scope (this will lead to decisions such as test/train, 10fold-cv or loocv)
- [Issue #2] Decide on sets of methods that fit the scope

1
mbmbm/benchmark/__init__.py

@ -0,0 +1 @@
import matplotlib

0
mbmbm/doc/datasets.md

0
mbmbm/doc/methods.md

392
poetry.lock

@ -84,6 +84,24 @@ python-versions = "*"
[package.extras]
test = ["flake8 (==3.7.8)", "hypothesis (==3.55.3)"]
[[package]]
name = "contourpy"
version = "1.0.6"
description = "Python library for calculating contours of 2D quadrilateral grids"
category = "main"
optional = false
python-versions = ">=3.7"
[package.dependencies]
numpy = ">=1.16"
[package.extras]
bokeh = ["bokeh", "selenium"]
docs = ["docutils (<0.18)", "sphinx (<=5.2.0)", "sphinx-rtd-theme"]
test = ["Pillow", "flake8", "isort", "matplotlib", "pytest"]
test-minimal = ["pytest"]
test-no-codebase = ["Pillow", "matplotlib", "pytest"]
[[package]]
name = "coverage"
version = "6.5.0"
@ -98,6 +116,14 @@ tomli = {version = "*", optional = true, markers = "python_full_version <= \"3.1
[package.extras]
toml = ["tomli"]
[[package]]
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description = "Composable style cycles"
category = "main"
optional = false
python-versions = ">=3.6"
[[package]]
name = "distlib"
version = "0.3.6"
@ -227,6 +253,28 @@ python-versions = "*"
lint = ["flake8"]
test = ["PyHamcrest", "pytest", "pytest-cov"]
[[package]]
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@ -298,6 +346,14 @@ pipfile-deprecated-finder = ["pipreqs", "requirementslib"]
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requirements-deprecated-finder = ["pip-api", "pipreqs"]
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@ -312,6 +368,26 @@ importlib-metadata = {version = ">=4.4", markers = "python_version < \"3.10\""}
[package.extras]
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[[package]]
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python-dateutil = ">=2.7"
setuptools_scm = ">=7"
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@ -369,7 +445,7 @@ python-versions = ">=3.8"
name = "packaging"
version = "21.3"
description = "Core utilities for Python packages"
category = "dev"
category = "main"
optional = false
python-versions = ">=3.6"
@ -395,6 +471,18 @@ python-versions = ">=3.7"
[package.dependencies]
flake8 = ">=3.9.1"
[[package]]
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description = "Python Imaging Library (Fork)"
category = "main"
optional = false
python-versions = ">=3.7"
[package.extras]
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[[package]]
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@ -488,7 +576,7 @@ markdown = ">=3.2"
name = "pyparsing"
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category = "dev"
category = "main"
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python-versions = ">=3.6.8"
@ -546,6 +634,17 @@ ruamel-yaml = ["ruamel.yaml (>=0.17)"]
toml = ["toml"]
yaml = ["ruamel.yaml (>=0.17)"]
[[package]]
name = "python-dateutil"
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description = "Extensions to the standard Python datetime module"
category = "main"
optional = false
python-versions = "!=3.0.*,!=3.1.*,!=3.2.*,>=2.7"
[package.dependencies]
six = ">=1.5"
[[package]]
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@ -609,7 +708,7 @@ python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*"
name = "setuptools"
version = "65.5.0"
description = "Easily download, build, install, upgrade, and uninstall Python packages"
category = "dev"
category = "main"
optional = false
python-versions = ">=3.7"
@ -618,11 +717,29 @@ docs = ["furo", "jaraco.packaging (>=9)", "jaraco.tidelift (>=1.4)", "pygments-g
testing = ["build[virtualenv]", "filelock (>=3.4.0)", "flake8 (<5)", "flake8-2020", "ini2toml[lite] (>=0.9)", "jaraco.envs (>=2.2)", "jaraco.path (>=3.2.0)", "mock", "pip (>=19.1)", "pip-run (>=8.8)", "pytest (>=6)", "pytest-black (>=0.3.7)", "pytest-checkdocs (>=2.4)", "pytest-cov", "pytest-enabler (>=1.3)", "pytest-flake8", "pytest-mypy (>=0.9.1)", "pytest-perf", "pytest-xdist", "tomli-w (>=1.0.0)", "virtualenv (>=13.0.0)", "wheel"]
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typing-extensions = "*"
[package.extras]
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toml = ["setuptools (>=42)"]
[[package]]
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category = "dev"
category = "main"
optional = false
python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*"
@ -654,7 +771,7 @@ python-versions = ">=2.6, !=3.0.*, !=3.1.*, !=3.2.*"
name = "tomli"
version = "2.0.1"
description = "A lil' TOML parser"
category = "dev"
category = "main"
optional = false
python-versions = ">=3.7"
@ -675,7 +792,7 @@ toml = ">=0.10.2"
name = "typing-extensions"
version = "4.4.0"
description = "Backported and Experimental Type Hints for Python 3.7+"
category = "dev"
category = "main"
optional = false
python-versions = ">=3.7"
@ -711,7 +828,7 @@ testing = ["flake8 (<5)", "func-timeout", "jaraco.functools", "jaraco.itertools"
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platformdirs = [
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@ -1023,6 +1393,10 @@ python-box = [
{file = "python_box-6.0.2-cp39-cp39-win_amd64.whl", hash = "sha256:99e9f88069855e76cbc4846527d35bc9d1858f2272ab741f29a71c92b72b7b5b"},
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]
python-dateutil = [
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]
python-kacl = [
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]
@ -1084,6 +1458,10 @@ setuptools = [
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]
setuptools-scm = [
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six = [
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1
pyproject.toml

@ -29,6 +29,7 @@ packages = [{include = "mbmbm"}]
[tool.poetry.dependencies]
python = "^3.8"
numpy = "^1.23.4"
matplotlib = "^3.6.2"
[tool.poetry.group.dev.dependencies]
autoflake = "*"

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